| E |
 |
|
Ecklund, A. 1997. The major
histocompatibility complex and mating preferences in wild house mice.
Behav. Ecol. 8:630-634.
Eddy, S. R. Hidden Markov models. Current Opinion in Structural Biology 6:361-365.
Eddy, S. R. 1998. Profile hidden Markov models. Bioinformatics 14:755-763. 
Edgar, R. C. and
S. Batzoglou. 2006. Multiple sequence alignment. Current Opinion in Structural Biology 16:368-373.
Edwards, A. W. F. and
L. L. Cavalli-Sforza. 1964. Reconstruction of evolutionary trees.
pp. 67-76 in Phenetic and Phylogenetic Classification,
ed. V. H. Heywood and J. McNeill. Systematics Association Publication
No. 6. Systematics Association, London.
Edwards, S. 1997. Relevance of
microevolutionary processes to higher level molecular
systematics. Pp. 251-278 in Avian Molecular Systematics and Evolution
(D. P. Mindell, ed.) Academic Press, New York.
Edwards, S. and P. Beerli. 2000.
Gene divergence, population divergence, and the variance in
coalescence time in phylogeographic studies. Evolution 54:
1839-1854.
Edwards, S. and M. Dillon. 2004. Hitchhiking and recombination in birds: evidence from Mhc-linked and unlinked loci in red-winged blackbirds (Agelaius phoeniceus). Genetical Research 84:175-192.
Edwards, S. V., B. Fertil, A. Giron, and P. J. Deschavanne. 2002. A genomic schism in birds revealed by phylogenetic analysis of DNA strings. Syst. Biol. 51:599-613.
Efron, B. 1979. Bootstrap methods:
another look at the jackknife. Ann. Stat. 7:1-26.
Efron, B. 1985. Bootstrap confidence
intervals for a class of parametric problems. Biometrika
72:45-58.
Eickbush, T. H. 1994. Origin and
evolutionary relationships of retroelements. In Evolutionary Biology
of Viruses (ed. S.S Morse), pp. 121-157. Raven press.
Eickbush, T. H. 1997. Telomerase and
retrotransposons: which came first? Science 277:911-912.
Eickbush, T. H. 1999. Exon shuffling in
retrospect. Science 283:1465-1467.
Eisen, J. A. 1998. A phylogenomic study
of the MutS family of proteins. Nucleic Acids Res. 26:4291-4300.
Eisen, J. A. 1998. Phylogenomics:
Improving functional predictions for uncharacterized genes by
evolutionary analysis. Genome Research 8:163-167.
Eisen, J. A. 2000a. Horizontal gene
transfer among microbial genomes: new insights from complete genome
analysis. Curr. Opinion Genetics Dev. 10:606-612.
Eisen, J. A. 2000b. Assessing evolutionary
relationships among microbes from whole genome analysis. Curr.
Opin. Microbiol. 3:475-480.
Eisen, J. A. 2002. Brouhaha over the other
yeast. Nature 415:845-848.
Eisen, J. A. and
Fraser, C.M. 2003. Phylogenomics: Intersection of Evolution and Genomics. Science. 300:1706-1707.
Eisen, J. A. and
P.C. Hanawalt. 1999. A phylogenomic study of DNA repair genes,
proteins, and processes. Mutat. Res. 435:171-213.
Eisen, J. A.,
J.F. Heidelberg, O. White, and S.L. Salzberg 2000. Evidence for
Symmetric Chromosomal Inversions around the Replication Origin in
Bacteria. Genome Biology 1:1-9.
Eisen, J. A., K. E. Nelson, I. T. Paulsen,
J. F. Heidelberg, M. Wu, R. J. Dodson, R. DeBoy, M. L. Gwinn,
W. C. Nelson, D. H. Haft, E. K. Hickey, J. D. Peterson, A. S. Durkin,
J. L. Kolonay, F. Yang, I. Holt, L. A. Umayam, T. Mason, M. Brenner,
T. P. Shea, D. Parksey, W. C. Nierman, T. V. Feldblyum, C. L. Hansen,
M. B. Craven, D. Radune, J. Vamatheva, H. Khouri, O. White,
J. C. Venter, T. M. Gruber, K. A. Ketchum, H. Tettelin, D. A. Bryant,
C. M. Fraser. 2002. The complete genome sequence of Chlorobium
tepidum TLS, a photosynthetic, anaerobic, green-sulfur
bacterium. Proc. Natl. Acad. Sci. USA 99:9509-9514.
Eisen, J. A., K. S. Sweder, and
P.C. Hanawalt. 1996. Evolution of the SNF2 family of proteins:
Subfamilies with distinct sequences and functions. Nucleic Acids
Res. 23:2715-2723.
Eisen, J. A. and
Wu, M. 2002. Phylogenetic Analysis and Gene Functional Predictions: Phylogenomics in Action. Theoretical Population Biology. 61:481-487.
Eisen, J. A. and
Fraser, C. M. 2003. Phylogenomics: Intersection of Evolution and Genomics. Science. 300:1706-1707.
Eiserling, F. 1983. Structure of the T4 virion. in Mathews, C., E. Kutter, G. Mosig, and P. Berget. Eds. Bacteriiophage T4. ASM publications, Washington, pp.1-24.
Endo, T., K. Ikeo, and T. Gojobori. 1996. Large-scale search for genes on which positive selection may operate. Molecular Biology and Evolution 13: 685-690.
Eshel I, Feldman MW. 1970. On the evolutionary effect of recombination.
Theor Popul Biol. 1(1):88-100.
Ewens WJ. 1972. The sampling theory of selectively neutral alleles. Theor Popul Biol. 3(1):87-112.
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