| Migrate-n |
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Migrate-n estimates effective population sizes and historic migration rates between populations using a migration matrix model that includes asymmetric migration rates and different subpopulation sizes (Beerli 2006). Paramters are estimated using maximum likelihood or Bayesian inference. The following types of input data can be analyzed: sequence data, single nucleotide polymorphism (SNP) data, microsatellite data, and electrophoretic data. In addition to estimates of population size and migration rate output files also include profile likelihood tables, percentiles, likelihood-ratio tests, and simple plots of the log-likelihood surfaces for all populations and all loci.
Version 2.5.1
Input data file format
PHYLIP
Instructions
To run Migrate-n locally, type the program name at a terminal window prompt:
migrate-n
2007 Example data files for migrate-n:
On-line documentation for the current official release of
Migrate-n.
Documentation (pdf) for the latest version of Migrate-n to be used in the 2008 workshop.
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